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Publications

50.   Shea KG, Jacobs JC, Carey JL, Anderson AF. Oxford JT. Osteochondritis Dissecans Knee Histology Studies Have Variable Findings and Theories of Etiology, Clinical Orthopaedics and Related Research 2012 in press.

49.  Fang M, Jacob R, McDougal O, Oxford JT., Minor fibrillar collagens, variable regions alternative splicing, intrinsic disorder, and tyrosine sulfation. Protein Cell. 2012 Jun;3(6):419-33.

48.  McDougal,O.M., Mallory, C., Warner, L.R., Oxford, J.T. “Predicted structure and binding motifs of alpha 1 (XI) collagen” 2011, JBio (GSTF International Journal on Bioinformatics and Biotechnology), vol. 1:43-48.

47. Mallory C , McDougal OM , Oxford JT. Collagen Type XI alpha-1 Chain Amino Propeptide Structural Model and Glycosaminoglycan Interactions in Silico, in Proceedings of 2011 International Conference on Bioinformatics & Computational Biology (ISBN #: 1-60132-172-4/CSREA), Editors: Hamid R. Arabnia and Quoc-Nam Tran, pp.: 632-635, Las Vegas, USA, 2011

46.  Brown, R., Mallory, C., McDougal, O.M., Oxford, J.T. “Proteomic analysis of Col11a1-associated protein complexes”. (2011) PROTEOMICS, 11(24):4660-76.

45.  Tawara, Kenneth, Oxford, Julia Thom, Jorcyk, CL. “Clinical significance of interleukin (IL)-6 in cancer metastasis to bone: potential of anti-IL-6 therapies.” (2011)  Cancer Management Research, 2011;3:177-89. Epub 2011 May 18

44.  Jeff P. Gorski, Nichole T. Huffman, Sridar Chittur, Ronald J. Midura, Claudine Black, Julie Oxford, and Nabil G. Seidah  Inhibition of SKI-1 proprotein convertase and caspase-3 blocks transcription of key extracellular matrix genes regulating osteoblastic mineralization, J Biol Chem. 2010 Nov 13. [Epub ahead of print]

43.  Fang M, Adams JS, McMahan BL, Brown RJ, Oxford JT. The expression patterns of minor fibrillar collagens during development in zebrafish Gene Expr Patterns 2010 Oct-Dec;10(7-8):315-22. Epub 2010 Jul 18, PMC2956583 [Available on 2011/10/1]

42.  Toumpoulis IK, Oxford JT, Cowan DB, Anagnostopoulos CE, Rokkas CK, Chamogeorgakis TP, Angouras DC, Shemin RJ, Navab M, Ericsson M, Federman M, Levitsky S, McCully JD. “Differential expression of collagen type V and XI alpha-1 in human ascending thoracic aortic aneurysms”, (2009), Ann Thorac Surg.  88:506-13.

41.  Yingst, S, Cole, J., Warner, L., Bloxham, K., Brown, R., Kenoyer, L., Knowlton, B., Oxford, JRT., “Characterization of Collagenous Matrix Assembly in a Chondrocyte Model System” (2009) Journal of Biomedical Materials Science, 90:247-55.

40. Takumi Takata, Julie T Oxford, Borries Demeler, and Kirsten J Lampi, “Deamidation destabilizes and triggers aggregation of a lens protein, A3-crystallin”, (2008) Protein Science. 17:1565-75. PMCID: PMC2525517 [Available on 09/01/09]

39.  Halsted, KC, Bowen, KB, Bond, L, Jorcyk, CJ, Fyffe, WE, Kronz, JD, Oxford, JT “Collagen XI α1 in normal and malignant breast tissue”, (2008) Modern Pathology. 21:1246-54. NIHMS# 77903.

38.  Bowen, KB, Reimers, AP, Luman, S, Kronz, JD, Fyffe, WE, Oxford, JT “Immunohistochemical localization of collagen type XI alpha 1 and alpha 2 chains in human colon tissue” (2008) Journal of Histochemistry and Cytochemistry, 56:275-283. PMCID: PMC2324180 [Available on 03/01/09]

37.  Kahler, R., Yingst, S., Krawczak, D., Oxford, J., and Westendorf, J. “Collagen 11a1 is indirectly activated by Lymphocyte Enhancer-binding factor 1 (Lef1) and negatively regulates osteoblast maturation” (2008) Matrix Biology, 27(4):330-8. PMCID: PMC2431459 [Available on 05/01/09].

36.  GerritsenM, Oxford, J.T., Frary, M., Henderson, J., Hampikian, J.M. “Immuno-SEM characterization of developing bovine cartilage”, (2008) Materials Science and EngineeringC, 28:341-346.

35.  Takata, T, Oxford JT, Brandon, TR, Lampi KJ, “Deamidation alters the structure and decreases the stability of human lens betaAlpha3-crystallin” (2007) Biochemistry, 46:8861-71.

34.  Dufty, BM, Warner, LR, Hou, ST, Jiang, SX, Gomez-Isla, T, Leenhouts, KM, Oxford, JT, Feany, MB, Masliah, E, Rohn TT, “Calpain-cleavage of a-synuclein; connecting proteolytic processing to disease-linked aggregation” (2007) Neurobiology 170:1725-38.

33.  Warner, L., Blasick, C., Brown, R., Oxford, J. “Expression, purification and refolding of recombinant collagen a1(XI) amino terminal domain splice variants”, (2007) Protein Expression and Purification, 52:403-409.

32.  Warner, L., Brown, R., Yingst, S and Oxford, J “Isoform-specific heparan sulfate binding within the amino terminal noncollagenous domain of collagen a1(XI)” , (2006) Journal of Biological Chemistry, 281:39507-16.

31.  Gerritsen, M., Hampikian, J., Knowlton, W., Oxford, J., Warner, L., Araujo, D., and Clark, Z. “Collagen fibrillogenesis on Ti-6Al-4V-ELI” in Coatings, Materials Science and Technology, (2005) pp. 97-100.

30.  Warner, L.R., Fallahi, A., Irwin, K., Yingst, S., Shadle, S., Oxford, J.T., “Modeling and characterization of the amino propeptide of collagen a1(XI), a regulatory domain in collagen fibrillar architecture” (2005) Procedings of the Materials Science Research Society, L.4.9.1-L.4.9.6.

29.  Fallahi, A., Kroll, B., Warner, L., Oxford, R., Irwin, K., Mercer, L., Shadle, S., Oxford, JRT. “Structural model of the amino propeptide of collagen XI alpha 1 chain with similarity to the LNS domains” (2005) Protein Science, 14(6) 1526-1537.

28.  Cusack SM, Rohn TT, Medeck RJ, Irwin KM, Brown RJ, Mercer LM, Oxford JT  ” Suppression of MeCP2beta expression inhibits neurite extension in PC12 cells” (2004) Experimental Cell Research 299: 442-53.

27.  Rohn TT, Cusack SM, Kessinger SR, Oxford JT “Caspase activation independent of cell death is required for proper cell dispersal and correct morphology in PC12 cells”.  (2004) Experimental Cell Research, 295: 215-225.

26.  Oxford JT, DeScala J, Morris N, Gregory K, Medeck R, Irwin K, Oxford R, Brown R, Mercer L, Cusack S.,  ” Interaction between amino propeptides of type XI procollagen alpha1 chains  (2004)  J Biol Chem. 279:10939-10945.

25.  Medeck, RJ, Sosa, S.,Morris, NP,Oxford, JT. ” BMP-1-mediated proteolytic processing of alternatively spliced isoforms of collagen type XI.”(2003) Biochemical Journal, 376: 361-8.

24.  Irwin, K., Doan, Phuong, Schimpf, Martin,  Oxford, Julia Thom “Studies of type XI collagen interaction”  (2003) Proceedings of the National Conference on Undergraduate Research (NCUR),  pp 1-8.

23.  Frisbie, DD, Oxford, JRT, Southwood, L., Trotter, GW, Rodkey, WG, Steadman, JR, Goodnight, J.L., McIlwraith, CW.   “Early events in cartilage repair after subchondral bone microfracture”  (2003) Clinical Orthopaedics and Related Research, 407:215-227.

22.  Chen Y, Sumiyoshi H,  Oxford JT, Yoshioka H, Ramirez F, P Morris N.” Cis-acting elements regulate alternative splicing of exons 6A, 6B and 8 of the alpha1(XI) collagen gene and contribute to the regional diversification of collagen XI matrices”. (2001)  Matrix Biology  20(8):589-99.

21.  Trumble, T.N., Trotter, G.W., Oxford, J.T., McIlwraith, C.W., Billinghurst, R.C., Frisbie, D.D. “Synovial fluid gelatinase concentrations and matrix metalloproteinase and cytokine expression in naturally occurring joint disease in horses”.(2001) American Journal of Veterinary Research, 62(9):1467-77.

20.  Lampi, K.J., Oxford, J.T., Shearer, T.R., David, L.L., Bachinger, H.P. and Kapfer, D., “Deamidation of human bB1 alters the elongated structure of the dimmer” (2001) Experimental Eye Research, 72(3):279-88.

19.  Fehr, J., Trotter, G.W., Oxford, J.T. “Comparison of Northern blot hybridization and a reverse transcriptase-polymerase chain reaction technique for measurement of mRNA expression of metalloproteinases and matrix components in articular cartilage and synovial membrane from horses with osteoarthritis.” (2000) American Journal of Veterinary Research, 61:900-5.

18.  Morris, N.P , Oxford, J.T., Davies, G.B.M., Smoody, B.F., Keene, D.R . “Developmentally regulated alternative splicing of the alpha 1 (XI) collagen chain:  spatial and temporal segregation of isoforms in the cartilage of fetal rat long bones”  (2000)  J  Histochemistry and Cytochemistry, 48: 725-41.

17.  Oxford, J., Taylor, M., DeScala, J. “Osteoprotegerin is expressed in degenerative joint disease”. (2000) Transactions Orthopaedic Researchvol 25, p. 1019.

16.  Chen, Y., Sumiyoshi, H., Gregory, K., Smoody, B., Oxford, J., Morris, N., “Regulation of alternative splicing of the amino terminal domain of alpha-1(XI) collagen”. (2000), Transactions Orthopaedic Research, vol 25, p. 9768.

15.  Gregory, K.E., Oxford, J.T., Chen, Y., Gambee, J. and Morris, N.P. “Structural organization of distinct domains within the non-collagenous N-terminal region of collagen type XI” (2000) Journal of Biological Chemistry275: 11498-506.

14.  Gregory, K., Chen, Y., Mechling, D., Smoody, F.,Oxford, J., Morris, N. “Structure of the amino terminal domain of the alpha-1(XI) collagen chain” (1999) Transactions Orthopaedic Researchvol 24, p. 812.

13.  Oxford, J., Frisbie, D., Trotter, G., Rodkey, W., Steadman, J., McIlwraith, C. “Enhancement of Articular cartilage repair of the femoral condyle using subchondral plate microfracture:  early expression of cartilage-specific markers indicating chondrogenesis” (1999) Transactions Orthopaedic Researchvol 24, p. 678.

12.  GBM Davis, JRT Oxford, LC Hausafus, BF Smoody and NP Morris. “Temporal and spatial expression of spliceforms of the a1(XI) collagen gene in fetal rat cartilage“ (1998) Developmental Dynamics, 213:13-26.

11.  GBM Davis, JRT Oxford, and NP Morris. “Expression of a1(XI) variants in developing cartilage.”  (1996)  Transactions Orthopaedic Researchvol. 21.

10.  Douglas R. Keene, Julia Thom Oxford and Nicholas P. Morris.  “Ultrastructural localization of collagen types II, IX and XI in the growth plate of human rib and fetal bovine epiphyseal cartilage:  type XI collagen is restricted to thin fibrils.” (1995) Journal of Histochemistry and Cytochemistry43:967-979.

9.  Julia Thom Oxford, Kurt J. Doege and Nicholas P. Morris.  “Alternative exon splicing within the amino terminal-nonhelical domain of the rat proa1(XI) collagen chain generates multiple forms of the mRNA transcript which exhibit tissue dependent variation.” (1995) Journal of Biological Chemistry, 270:9478-9485.

8.  Y. Li, D.A. Laccerda, M.L. Warman, D.R. Beier, H. Yoshioka, Y. Ninomiya, J.T. Oxford, N.P. Morris, K. Andrikopoulos, F. Ramirez, B.B. Wardell, G. D. Lifferth, C. Teuscher, S.R. Woodward, B.A. Taylor, R.E. Seegmiller, and B.R. Olsen.  “A Fibrillar collagen gene, Col11a1, is essential for skeletal morphogenesis.” (1995) Cell80, 423-430.

7.  Morris, N.P., Keene, D.R. and Oxford, J.R.T.,”Ultrastructural localization of type XI collagen in human growth plate cartilage.” (1994) Transactions  Orthopaedic Research19, 423.

6.  Julia Thom Oxford, Kurt J. Doege, Walter E. Horton, Jr. and Nicholas P. Morris.  “Characterization of type II and type XI collagen synthesis by an immortalized rat chondrocyte cell line (IRC) having a low level of type II collagen mRNA expression.”  (1994) Experimental Cell Research213, 28-36.

5.  Julia R. Thom and Nicholas P. Morris.  “Biosynthesis and proteolytic processing of Type XI collagen in embryonic chick sterna.”  (1991) Journal of Biological Chemistry, 266, 7262-7269.

4.  Julia R. Thom, Kurt Doege, Walter Horton and Nicholas P. Morris.  “A stably transformed line of rat chondrocytes synthesize type XI but not type II collagen.”  (1990) Journal of Cell Biology, 111, 23a.

3.  Julia R. Thom and Linda L. Randall. “The Role of the Leader Peptide of Maltose‑Binding Protein in Two Steps of the Export Process.” (1988) Journal of Bacteriology, 170, 5645‑5661.

2.   Simon J. S. Hardy, Julia R. Thom and Linda L. Randall.  “Export of Protein.” (1987) Annual Reviews of Microbiology, 41, 507‑541

1.  Akihiro Iida, James Groarke, Soonheuy Park, Julia Thom, Jaime Zabicky, Gerald Hazelbauer and Linda Randall. “A signal sequence mutant defective in export of ribose‑binding protein and a corresponding pseudorevertant isolated without imposed selection.” (1985) The EMBO Journal, 4, 1875-80.

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